NGS
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By analyzing 16S rRNA gene sequence and representative biomarkers for bacterial species, it is possible to identify the taxonomic composition and genetic diversity of microorganisms from various environmental samples including, foods, soil, water, and animal feces, etc.
·This sequencing method can be applied to investigate pathogen contamination, examine the functionality of probiotics, and identify non-culturable bacterial, etc.
Microbial community of probiotics in species level
· Illumina MiSeq
· Oxford Nanopore MinION